Journal Article
P. L. Kramer, Xu, H., Woltjer, R. L., Westaway, S. K., Clark, D., Erten-Lyons, D., Kaye, J. A., Welsh-Bohmer, K. A., Troncoso, J. C., Markesbery, W. R., Petersen, R. C., R Turner, S., Kukull, W. A., Bennett, D. A., Galasko, D., Morris, J. C., and Ott, J.,
“Alzheimer disease pathology in cognitively healthy elderly: a genome-wide study.”,
Neurobiol Aging, vol. 32, no. 12, pp. 2113-22, 2011.
J. M. van der Walt, Dementieva, Y. A., Martin, E. R., Scott, W. K., Nicodemus, K. K., Kroner, C. C., Welsh-Bohmer, K. A., Saunders, A. M., Roses, A. D., Small, G. W., Schmechel, D. E., P Doraiswamy, M., Gilbert, J. R., Haines, J. L., Vance, J. M., and Pericak-Vance, M. A.,
“Analysis of European mitochondrial haplogroups with Alzheimer disease risk.”,
Neurosci Lett, vol. 365, no. 1, pp. 28-32, 2004.
R. A. Nafikov, Nato, A. Q., Sohi, H., Wang, B., Brown, L., Horimoto, A. R., Vardarajan, B. N., Barral, S. M., Tosto, G., Mayeux, R. P., Thornton, T. A., Blue, E., and Wijsman, E. M.,
“Analysis of pedigree data in populations with multiple ancestries: Strategies for dealing with admixture in Caribbean Hispanic families from the ADSP.”,
Genet Epidemiol, vol. 42, no. 6, pp. 500-515, 2018.
F. W. Lohoff, Sander, T., Ferraro, T. N., Dahl, J. P., Gallinat, J., and Berrettini, W. H.,
“Confirmation of association between the Val66Met polymorphism in the brain-derived neurotrophic factor (BDNF) gene and bipolar I disorder.”,
Am J Med Genet B Neuropsychiatr Genet, vol. 139B, no. 1, pp. 51-3, 2005.
M. Saleh, Vaillancourt, J. P., Graham, R. K., Huyck, M., Srinivasula, S. M., Alnemri, E. S., Steinberg, M. H., Nolan, V., Baldwin, C. T., Hotchkiss, R. S., Buchman, T. G., Zehnbauer, B. A., Hayden, M. R., Farrer, L. A., Roy, S., and Nicholson, D. W.,
“Differential modulation of endotoxin responsiveness by human caspase-12 polymorphisms.”,
Nature, vol. 429, no. 6987, pp. 75-9, 2004.
Y. Li, Chen, J. A., Sears, R. L., Gao, F., Klein, E. D., Karydas, A., Geschwind, M. D., Rosen, H. J., Boxer, A. L., Guo, W., Pellegrini, M., Horvath, S., Miller, B. L., Geschwind, D. H., and Coppola, G.,
“An epigenetic signature in peripheral blood associated with the haplotype on 17q21.31, a risk factor for neurodegenerative tauopathy.”,
PLoS Genet, vol. 10, no. 3, p. e1004211, 2014.
J. Mez, Mukherjee, S., Thornton, T., Fardo, D. W., Trittschuh, E., Sutti, S., Sherva, R., Kauwe, J. S., Naj, A. C., Beecham, G. W., Gross, A., Saykin, A. J., Green, R. C., and Crane, P. K.,
“The executive prominent/memory prominent spectrum in Alzheimer's disease is highly heritable.”,
Neurobiol Aging, vol. 41, pp. 115-121, 2016.
J. H. Lee, Cheng, R., Rogaeva, E., Meng, Y., Stern, Y., Santana, V., Lantigua, R., Medrano, M., Jimenez-Velazquez, I. Z., Farrer, L. A., St George-Hyslop, P., and Mayeux, R.,
“Further examination of the candidate genes in chromosome 12p13 locus for late-onset Alzheimer disease.”,
Neurogenetics, vol. 9, no. 2, pp. 127-38, 2008.
A. Akomolafe, Lunetta, K. L., Erlich, P. M., Cupples, L. A., Baldwin, C. T., Huyck, M., Green, R. C., and Farrer, L. A.,
“Genetic association between endothelial nitric oxide synthase and Alzheimer disease.”,
Clin Genet, vol. 70, no. 1, pp. 49-56, 2006.
R. K. Gopalraj, Zhu, H., Kelly, J. F., Mendiondo, M., Pulliam, J. F., Bennett, D. A., and Estus, S.,
“Genetic association of low density lipoprotein receptor and Alzheimer's disease.”,
Neurobiol Aging, vol. 26, no. 1, pp. 1-7, 2005.
M. Malik, Chiles, J., Xi, H. S., Medway, C., Simpson, J., Potluri, S., Howard, D., Liang, Y., Paumi, C. M., Mukherjee, S., Crane, P., Younkin, S., Fardo, D. W., and Estus, S.,
“Genetics of CD33 in Alzheimer's disease and acute myeloid leukemia.”,
Hum Mol Genet, vol. 24, no. 12, pp. 3557-70, 2015.
M. I. Kamboh, Barmada, M. M., Demirci, F. Y., Minster, R. L., Carrasquillo, M. M., Pankratz, V. S., Younkin, S. G., Saykin, A. J., Sweet, R. A., Feingold, E., DeKosky, S. T., and Lopez, O. L.,
“Genome-wide association analysis of age-at-onset in Alzheimer's disease.”,
Mol Psychiatry, vol. 17, no. 12, pp. 1340-6, 2012.
L. Bertram, Lange, C., Mullin, K., Parkinson, M., Hsiao, M., Hogan, M. F., Schjeide, B. M. M., Hooli, B., Divito, J., Ionita, I., Jiang, H., Laird, N., Moscarillo, T., Ohlsen, K. L., Elliott, K., Wang, X., Hu-Lince, D., Ryder, M., Murphy, A., Wagner, S. L., Blacker, D., K Becker, D., and Tanzi, R. E.,
“Genome-wide association analysis reveals putative Alzheimer's disease susceptibility loci in addition to APOE.”,
Am J Hum Genet, vol. 83, no. 5, pp. 623-32, 2008.
Y. Deming, Li, Z., Kapoor, M., Harari, O., Del-Aguila, J. L., Black, K., Carrell, D., Cai, Y., Fernández, M. Victoria, Budde, J., Ma, S., Saef, B., Howells, B., Huang, K. - L., Bertelsen, S., Fagan, A. M., Holtzman, D. M., Morris, J. C., Kim, S., Saykin, A. J., De Jager, P. L., Albert, M., Moghekar, A., O'Brien, R., Riemenschneider, M., Petersen, R. C., Blennow, K., Zetterberg, H., Minthon, L., Van Deerlin, V. M., Lee, V. Man- Yee, Shaw, L. M., Trojanowski, J. Q., Schellenberg, G., Haines, J. L., Mayeux, R., Pericak-Vance, M. A., Farrer, L. A., Peskind, E. R., Li, G., Di Narzo, A. F., Kauwe, J. S. K., Goate, A. M., and Cruchaga, C.,
“Genome-wide association study identifies four novel loci associated with Alzheimer's endophenotypes and disease modifiers.”,
Acta Neuropathol, vol. 133, no. 5, pp. 839-856, 2017.
B. W. Kunkle, Jaworski, J., Barral, S., Vardarajan, B., Beecham, G. W., Martin, E. R., Cantwell, L. S., Partch, A., Bird, T. D., Raskind, W. H., DeStefano, A. L., Carney, R. M., Cuccaro, M., Vance, J. M., Farrer, L. A., Goate, A. M., Foroud, T., Mayeux, R. P., Schellenberg, G. D., Haines, J. L., and Pericak-Vance, M. A.,
“Genome-wide linkage analyses of non-Hispanic white families identify novel loci for familial late-onset Alzheimer's disease.”,
Alzheimers Dement, vol. 12, no. 1, pp. 2-10, 2016.
Y. - C. Hwang, Zheng, Q., Gregory, B. D., and San Wang, L. -,
“High-throughput identification of long-range regulatory elements and their target promoters in the human genome.”,
Nucleic Acids Res, vol. 41, no. 9, pp. 4835-46, 2013.
Y. - C. Hwang, Lin, C. - F., Valladares, O., Malamon, J., Kuksa, P. P., Zheng, Q., Gregory, B. D., and San Wang, L. -,
“HIPPIE: a high-throughput identification pipeline for promoter interacting enhancer elements.”,
Bioinformatics, vol. 31, no. 8, pp. 1290-2, 2015.
C. Reitz, Tosto, G., Vardarajan, B., Rogaeva, E., Ghani, M., Rogers, R. S., Conrad, C., Haines, J. L., Pericak-Vance, M. A., Fallin, M. D., Foroud, T., Farrer, L. A., Schellenberg, G. D., George-Hyslop, P. S., and Mayeux, R.,
“Independent and epistatic effects of variants in VPS10-d receptors on Alzheimer disease risk and processing of the amyloid precursor protein (APP).”,
Transl Psychiatry, vol. 3, p. e256, 2013.
M. T. W. Ebbert, Boehme, K. L., Wadsworth, M. E., Staley, L. A., Mukherjee, S., Crane, P. K., Ridge, P. G., and Kauwe, J. S. K.,
“Interaction between variants in CLU and MS4A4E modulates Alzheimer's disease risk.”,
Alzheimers Dement, vol. 12, no. 2, pp. 121-129, 2016.
J. A. Chen, Wang, Q., Davis-Turak, J., Li, Y., Karydas, A. M., Hsu, S. C., Sears, R. L., Chatzopoulou, D., Huang, A. Y., Wojta, K. J., Klein, E., Lee, J., Beekly, D. L., Boxer, A., Faber, K. M., Haase, C. M., Miller, J., Poon, W. W., Rosen, A., Rosen, H., Sapozhnikova, A., Shapira, J., Varpetian, A., Foroud, T. M., Levenson, R. W., Levey, A. I., Kukull, W. A., Mendez, M. F., Ringman, J., Chui, H., Cotman, C., DeCarli, C., Miller, B. L., Geschwind, D. H., and Coppola, G.,
“A multiancestral genome-wide exome array study of Alzheimer disease, frontotemporal dementia, and progressive supranuclear palsy.”,
JAMA Neurol, vol. 72, no. 4, pp. 414-22, 2015.
J. H. Lee, Barral, S., and Reitz, C.,
“The neuronal sortilin-related receptor gene SORL1 and late-onset Alzheimer's disease.”,
Curr Neurol Neurosci Rep, vol. 8, no. 5, pp. 384-91, 2008.
R. Guerreiro, Brás, J., Hardy, J., and Singleton, A.,
“Next generation sequencing techniques in neurological diseases: redefining clinical and molecular associations.”,
Hum Mol Genet, vol. 23, no. R1, pp. R47-53, 2014.
Y. Le Guen, Belloy, M. E., Napolioni, V., Eger, S. J., Kennedy, G., Tao, R., He, Z., and Greicius, M. D.,
“A novel age-informed approach for genetic association analysis in Alzheimer's disease.”,
Alzheimers Res Ther, vol. 13, no. 1, p. 72, 2021.
D. A. Bennett, Schneider, J. A., Arvanitakis, Z., and Wilson, R. S.,
“Overview and findings from the religious orders study.”,
Curr Alzheimer Res, vol. 9, no. 6, pp. 628-45, 2012.
S. Mirarab, Nguyen, N., Guo, S., San Wang, L. -, Kim, J., and Warnow, T.,
“PASTA: Ultra-Large Multiple Sequence Alignment for Nucleotide and Amino-Acid Sequences.”,
J Comput Biol, vol. 22, no. 5, pp. 377-86, 2015.
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