Biblio

Found 7 results

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Journal Article

P. Ryvkin, Leung, Y. Yee, Ungar, L. H., Gregory, B. D., and San Wang, L. -, “Using machine learning and high-throughput RNA sequencing to classify the precursors of small non-coding RNAs.”, Methods, vol. 67, no. 1, pp. 28-35, 2014.

A. Amlie-Wolf, Ryvkin, P., Tong, R., Dragomir, I., Suh, E. R., Xu, Y., Van Deerlin, V. M., Gregory, B. D., Kwong, L. K., Trojanowski, J. Q., Lee, V. M. - Y., San Wang, L. -, and Lee, E. B., “Transcriptomic Changes Due to Cytoplasmic TDP-43 Expression Reveal Dysregulation of Histone Transcripts and Nuclear Chromatin.”, PLoS One, vol. 10, no. 10, p. e0141836, 2015.

Y. - C. Hwang, Lin, C. - F., Valladares, O., Malamon, J., Kuksa, P. P., Zheng, Q., Gregory, B. D., and San Wang, L. -, “HIPPIE: a high-throughput identification pipeline for promoter interacting enhancer elements.”, Bioinformatics, vol. 31, no. 8, pp. 1290-2, 2015.

Y. - C. Hwang, Zheng, Q., Gregory, B. D., and San Wang, L. -, “High-throughput identification of long-range regulatory elements and their target promoters in the human genome.”, Nucleic Acids Res, vol. 41, no. 9, pp. 4835-46, 2013.

P. Ryvkin, Leung, Y. Yee, Silverman, I. M., Childress, M., Valladares, O., Dragomir, I., Gregory, B. D., and San Wang, L. -, “HAMR: high-throughput annotation of modified ribonucleotides.”, RNA, vol. 19, no. 12, pp. 1684-92, 2013.

Y. Yee Leung, Kuksa, P. P., Amlie-Wolf, A., Valladares, O., Ungar, L. H., Kannan, S., Gregory, B. D., and San Wang, L. -, “DASHR: database of small human noncoding RNAs.”, Nucleic Acids Res, vol. 44, no. D1, pp. D216-22, 2016.

Y. Yee Leung, Ryvkin, P., Ungar, L. H., Gregory, B. D., and San Wang, L. -, “CoRAL: predicting non-coding RNAs from small RNA-sequencing data.”, Nucleic Acids Res, vol. 41, no. 14, p. e137, 2013.