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G
Dumitrescu L
,
Mahoney ER
,
Mukherjee S
,
Lee ML
,
Bush WS
,
Engelman CD
,
Lu Q
,
Fardo DW
,
Trittschuh EH
,
Mez J
et al.
. 2020.
Genetic variants and functional pathways associated with resilience to Alzheimer's disease.
.
Brain. 143(8):2561-2575.
PubMed
Blue EE
,
Bis JC
,
Dorschner MO
,
Tsuang DW
,
Barral SM
,
Beecham G
,
Below JE
,
Bush WS
,
Butkiewicz M
,
Cruchaga C
et al.
. 2018.
Genetic Variation in Genes Underlying Diverse Dementias May Explain a Small Proportion of Cases in the Alzheimer's Disease Sequencing Project.
.
Dement Geriatr Cogn Disord. 45(1-2):1-17.
PubMed
Chia R
,
Sabir MS
,
Bandres-Ciga S
,
Saez-Atienzar S
,
Reynolds RH
,
Gustavsson E
,
Walton RL
,
Ahmed S
,
Viollet C
,
Ding J
et al.
. 2021.
Genome sequencing analysis identifies new loci associated with Lewy body dementia and provides insights into its genetic architecture.
.
Nat Genet. 53(3):294-303.
PubMed
DeMichele-Sweet MAnn A
,
Klei L
,
Creese B
,
Harwood JC
,
Weamer EA
,
McClain L
,
Sims R
,
Hernández I
,
Moreno-Grau S
,
Tarraga L
et al.
. 2021.
Genome-wide association identifies the first risk loci for psychosis in Alzheimer disease.
.
Mol Psychiatry. 26(10):5797-5811.
PubMed
van der Lee SJ
,
Knol MJ
,
Chauhan G
,
Satizabal CL
,
Smith AVernon
,
Hofer E
,
Bis JC
,
Hibar DP
,
Hilal S
,
van den Akker EB
et al.
. 2019.
A genome-wide association study identifies genetic loci associated with specific lobar brain volumes.
.
Commun Biol. 2:285.
PubMed
de Vries PS
,
Sabater-Lleal M
,
Huffman JE
,
Marten J
,
Song C
,
Pankratz N
,
Bartz TM
,
de Haan HG
,
Delgado GE
,
Eicher JD
et al.
. 2019.
A genome-wide association study identifies new loci for factor VII and implicates factor VII in ischemic stroke etiology.
.
Blood. 133(9):967-977.
PubMed
Yan Q
,
Nho K
,
Del-Aguila JL
,
Wang X
,
Risacher SL
,
Fan K-H
,
Snitz BE
,
Aizenstein HJ
,
Mathis CA
,
Lopez OL
et al.
. 2021.
Genome-wide association study of brain amyloid deposition as measured by Pittsburgh Compound-B (PiB)-PET imaging.
.
Mol Psychiatry. 26(1):309-321.
PubMed
Sherva R
,
Gross A
,
Mukherjee S
,
Koesterer R
,
Amouyel P
,
Bellenguez C
,
Dufouil C
,
Bennett DA
,
Chibnik L
,
Cruchaga C
et al.
. 2020.
Genome-wide association study of rate of cognitive decline in Alzheimer's disease patients identifies novel genes and pathways.
.
Alzheimers Dement. 16(8):1134-1145.
PubMed
Wang H
,
Bennett DA
,
De Jager PL
,
Zhang Q-Y
,
Zhang H-Y
. 2021.
Genome-wide epistasis analysis for Alzheimer's disease and implications for genetic risk prediction.
.
Alzheimers Res Ther. 13(1):55.
PubMed
Huan T
,
Joehanes R
,
Song C
,
Peng F
,
Guo Y
,
Mendelson M
,
Yao C
,
Liu C
,
Ma J
,
Richard M
et al.
. 2019.
Genome-wide identification of DNA methylation QTLs in whole blood highlights pathways for cardiovascular disease.
.
Nat Commun. 10(1):4267.
PubMed
Kunkle BW
,
Jaworski J
,
Barral S
,
Vardarajan B
,
Beecham GW
,
Martin ER
,
Cantwell LS
,
Partch A
,
Bird TD
,
Raskind WH
et al.
. 2016.
Genome-wide linkage analyses of non-Hispanic white families identify novel loci for familial late-onset Alzheimer's disease.
.
Alzheimers Dement. 12(1):2-10.
PubMed
Nho K
,
Nudelman K
,
Allen M
,
Hodges A
,
Kim S
,
Risacher SL
,
Apostolova LG
,
Lin K
,
Lunnon K
,
Wang X
et al.
. 2020.
Genome-wide transcriptome analysis identifies novel dysregulated genes implicated in Alzheimer's pathology.
.
Alzheimers Dement. 16(9):1213-1223.
PubMed
Kunji K
,
Ullah E
,
Nato AQ
,
Wijsman EM
,
Saad M
. 2018.
GIGI-Quick: a fast approach to impute missing genotypes in genome-wide association family data.
.
Bioinformatics. 34(9):1591-1593.
PubMed
Fulton-Howard B
,
Goate AM
,
Adelson RP
,
Koppel J
,
Gordon ML
,
Barzilai N
,
Atzmon G
,
Davies P
,
Freudenberg-Hua Y
. 2021.
Greater effect of polygenic risk score for Alzheimer's disease among younger cases who are apolipoprotein E-ε4 carriers.
.
Neurobiol Aging. 99:101.e1-101.e9.
PubMed
Marioni RE
,
Harris SE
,
Zhang Q
,
McRae AF
,
Hagenaars SP
,
W Hill D
,
Davies G
,
Ritchie CW
,
Gale CR
,
Starr JM
et al.
. 2018.
GWAS on family history of Alzheimer's disease.
.
Transl Psychiatry. 8(1):99.
PubMed
H
Wheeler NR
,
Benchek P
,
Kunkle BW
,
Hamilton-Nelson KL
,
Warfe M
,
Fondran JR
,
Haines JL
,
Bush WS
. 2020.
Hadoop and PySpark for reproducibility and scalability of genomic sequencing studies.
.
Pac Symp Biocomput. 25:523-534.
PubMed
Smith EE
,
Biessels GJan
,
De Guio F
,
de Leeuw FErik
,
Duchesne S
,
Düring M
,
Frayne R
,
M Ikram A
,
Jouvent E
,
MacIntosh BJ
et al.
. 2019.
Harmonizing brain magnetic resonance imaging methods for vascular contributions to neurodegeneration.
.
Alzheimers Dement (Amst). 11:191-204.
PubMed
Wu HMan
,
Goate AM
,
O'Reilly PF
. 2021.
Heterogeneous effects of genetic risk for Alzheimer's disease on the phenome.
.
Transl Psychiatry. 11(1):406.
PubMed
Ewers M
,
Biechele G
,
Suárez-Calvet M
,
Sacher C
,
Blume T
,
Morenas-Rodriguez E
,
Deming Y
,
Piccio L
,
Cruchaga C
,
Kleinberger G
et al.
. 2020.
Higher CSF sTREM2 and microglia activation are associated with slower rates of beta-amyloid accumulation.
.
EMBO Mol Med. 12(9):e12308.
PubMed
Kuksa PP
,
Amlie-Wolf A
,
Hwang Y-C
,
Valladares O
,
Gregory BD
,
San Wang L-
. 2020.
HIPPIE2: a method for fine-scale identification of physically interacting chromatin regions.
.
NAR Genom Bioinform. 2(2):lqaa022.
PubMed
Kuksa PP
,
Li F
,
Kannan S
,
Gregory BD
,
Leung YYee
,
San Wang L-
. 2020.
HiPR: High-throughput probabilistic RNA structure inference.
.
Comput Struct Biotechnol J. 18:1539-1547.
PubMed
Farron MR
,
Kabeto MU
,
Dey ABallav
,
Banerjee J
,
Levine DA
,
Langa KM
. 2020.
Hypertension and Cognitive Health Among Older Adults in India.
.
J Am Geriatr Soc. 68 Suppl 3:S29-S35.
PubMed
I
Lo M-T
,
Kauppi K
,
Fan C-C
,
Sanyal N
,
Reas ET
,
Sundar VS
,
Lee W-C
,
Desikan RS
,
McEvoy LK
,
Chen C-H
. 2019.
Identification of genetic heterogeneity of Alzheimer's disease across age.
.
Neurobiol Aging. 84:243.e1-243.e9.
PubMed
He Z
,
Liu L
,
Wang C
,
Le Guen Y
,
Lee J
,
Gogarten S
,
Lu F
,
Montgomery S
,
Tang H
,
Silverman EK
et al.
. 2021.
Identification of putative causal loci in whole-genome sequencing data via knockoff statistics.
.
Nat Commun. 12(1):3152.
PubMed
Baird DA
,
Liu JZ
,
Zheng J
,
Sieberts SK
,
Perumal T
,
Elsworth B
,
Richardson TG
,
Chen C-Y
,
Carrasquillo MM
,
Allen M
et al.
. 2021.
Identifying drug targets for neurological and psychiatric disease via genetics and the brain transcriptome.
.
PLoS Genet. 17(1):e1009224.
PubMed
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