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Cognitive biomarker prioritization in Alzheimer's Disease using brain morphometric data.

TitleCognitive biomarker prioritization in Alzheimer's Disease using brain morphometric data.
Publication TypeJournal Article
Year of Publication2020
AuthorsPeng B, Yao X, Risacher SL, Saykin AJ, Shen L, Ning X
Corporate AuthorsADNI
JournalBMC Med Inform Decis Mak
Volume20
Issue1
Pagination319
Date Published2020 12 02
ISSN1472-6947
KeywordsAlzheimer Disease, Biomarkers, Brain, Cognition, Cognitive Dysfunction, Computational Biology, Humans, Image Interpretation, Computer-Assisted, Machine Learning, Magnetic Resonance Imaging
Abstract

BACKGROUND: Cognitive assessments represent the most common clinical routine for the diagnosis of Alzheimer's Disease (AD). Given a large number of cognitive assessment tools and time-limited office visits, it is important to determine a proper set of cognitive tests for different subjects. Most current studies create guidelines of cognitive test selection for a targeted population, but they are not customized for each individual subject. In this manuscript, we develop a machine learning paradigm enabling personalized cognitive assessments prioritization.
METHOD: We adapt a newly developed learning-to-rank approach [Formula: see text] to implement our paradigm. This method learns the latent scoring function that pushes the most effective cognitive assessments onto the top of the prioritization list. We also extend [Formula: see text] to better separate the most effective cognitive assessments and the less effective ones.
RESULTS: Our empirical study on the ADNI data shows that the proposed paradigm outperforms the state-of-the-art baselines on identifying and prioritizing individual-specific cognitive biomarkers. We conduct experiments in cross validation and level-out validation settings. In the two settings, our paradigm significantly outperforms the best baselines with improvement as much as 22.1% and 19.7%, respectively, on prioritizing cognitive features.
CONCLUSIONS: The proposed paradigm achieves superior performance on prioritizing cognitive biomarkers. The cognitive biomarkers prioritized on top have great potentials to facilitate personalized diagnosis, disease subtyping, and ultimately precision medicine in AD.

DOI10.1186/s12911-020-01339-z
Pubmed Linkhttps://www.ncbi.nlm.nih.gov/pubmed/33267852?dopt=Abstract
page_expoInternal
Alternate JournalBMC Med Inform Decis Mak
PubMed ID33267852
PubMed Central IDPMC7709267
Grant ListR01 EB022574 / EB / NIBIB NIH HHS / United States
R01 AG019771 / AG / NIA NIH HHS / United States
P30 AG010133 / AG / NIA NIH HHS / United States
1837964 / / Division of Information and Intelligent Systems / International
1855501 / / Division of Information and Intelligent Systems / International

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