RELB

v-rel avian reticuloendotheliosis viral oncogene homolog B

Also known as: I-REL, IREL, REL-B

Genomic Context

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chr19, (45504707..45541456)

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Variant Effect Impact (snpEff)

  • High
  • Moderate
  • Low
  • Modifier
  • Not Reported

Functional Genomics within Gene Promoter Region

ChIP-Seq TFBS from ENCODE

ChIP-Seq sites for transcription factor binding (from selected brain-relevant ENCODE tracks) within the promoter region of this gene. See methods for more information.

To view functional genomics annotations on the genome browser, first select tracks in the table below and then use the provided button to load the tracks on the browser.

Hits Track Platform Cell Type Tissue Antibody Target Functional Genomics
1
FOXP2 TFBS ChIP-seq on human PFSK-1
ChIP-seq neuroectodermal tumor (PFSK-1) brain FOXP2 transcription factor binding site
1
REST TFBS ChIP-seq on human U87
ChIP-seq glioblastoma cell N/A REST transcription factor binding site
1
USF1 TFBS ChIP-seq on human SK-N-SH_RA
ChIP-seq neuroblastoma N/A USF, USF1 transcription factor binding site
1
YY1 TFBS ChIP-seq on human SK-N-SH_RA
ChIP-seq neuroblastoma N/A YY1 transcription factor binding site

SNPs within Expressed Enhancers Sites from FANTOM5

SNPs associated with FANTOM5 identified expressed enhancers proximal to the transcription start site of this gene (tissue independent). See methods for more information.