SNPs are colored by the putative impact of the most deleterious effect identified using the snpEff genetic variant annotation and effect prediction toolbox. Effect impacts are colored as follows:
- Not Reported
Click on individual SNPs to view variant annotation details.
To enhance readability, functional genomics tracks are colored by type.
- Histone Modification Site
- Transcription Factor Binding Site
- DNase Hypersensitivity Site
- Expressed Enhancer Region
GWAS Summary Statistics
Mouse-over bars to view p-value support for the variant-trait association.
The displayed values are the -log10 p-value.
Scales are standardized across all tracks to a minimum p-value of 1 x 10-50 (-log10 p = 50). Scores exceeding that cutoff are indicated by a bar with a red tip.