Whole-Exome Concordant SNV PLINK Fileset Now Available in Release 6

On December 8, 2015, the ADSP has releasd their sixth data release on dbGaP (phs000572.v6.p4).

This sixth release includes:

(1) WES Plink fileset and Mendelian Inconsistencies

(2) WES yearly phenotype updates

(3) WES sample removal from analysis

(4) WES subject ID updates.

Please use the release notes provided by dbGaP as a guide for subject/sample changes.

Past Data Releases:

• The first ADSP data release occurred on November 25, 2013. It included the whole-genome sequencing data in BAM file format on 410 individuals.
• The second ADSP data release occurred on March 31, 2014, and included the whole-genome sequencing data in BAM file format for an additional 168 individuals.
• The third ADSP data release occurred on November 03, 2014 and included whole-exome sequencing data in BAM file format for 10,939 individuals.
• The fourth ADSP data release occurred on February 13, 2015 and included revised ethnic data for subjects with whole-exome sequencing data.
• The fifth ADSP data release occurred on July 13, 2015 and included whole-genome genotypes and updated phenotypes as well as changes to pedigree structures and sample IDs.

The ADSP data portal provides a customized interface for users to quickly identify and retrieve files by covariates, phenotypes, and data properties such as sequencing facility or coverage.