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Bush, William S
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F
Butkiewicz M
,
Blue EE
,
Leung YYee
,
Jian X
,
Marcora E
,
Renton AE
,
Kuzma A
,
San Wang L-
,
Koboldt DC
,
Haines JL
et al.
. 2018.
Functional annotation of genomic variants in studies of late-onset Alzheimer's disease.
.
Bioinformatics. 34(16):2724-2731.
PubMed
G
Pillai JA
,
Bebek G
,
Khrestian M
,
Bena J
,
Bergmann CC
,
Bush WS
,
Leverenz JB
,
Bekris LM
. 2021.
Gene Variants and Related Soluble TNFR2 Levels Impact Resilience in Alzheimer's Disease.
.
Front Aging Neurosci. 13:638922.
PubMed
Dumitrescu L
,
Mahoney ER
,
Mukherjee S
,
Lee ML
,
Bush WS
,
Engelman CD
,
Lu Q
,
Fardo DW
,
Trittschuh EH
,
Mez J
et al.
. 2020.
Genetic variants and functional pathways associated with resilience to Alzheimer's disease.
.
Brain. 143(8):2561-2575.
PubMed
Blue EE
,
Bis JC
,
Dorschner MO
,
Tsuang DW
,
Barral SM
,
Beecham G
,
Below JE
,
Bush WS
,
Butkiewicz M
,
Cruchaga C
et al.
. 2018.
Genetic Variation in Genes Underlying Diverse Dementias May Explain a Small Proportion of Cases in the Alzheimer's Disease Sequencing Project.
.
Dement Geriatr Cogn Disord. 45(1-2):1-17.
PubMed
H
Wheeler NR
,
Benchek P
,
Kunkle BW
,
Hamilton-Nelson KL
,
Warfe M
,
Fondran JR
,
Haines JL
,
Bush WS
. 2020.
Hadoop and PySpark for reproducibility and scalability of genomic sequencing studies.
.
Pac Symp Biocomput. 25:523-534.
PubMed
I
Griswold AJ
,
Sivasankaran SK
,
Van Booven D
,
Gardner OK
,
Rajabli F
,
Whitehead PL
,
Hamilton-Nelson KL
,
Adams LD
,
Scott AM
,
Hofmann NK
et al.
. 2020.
Immune and Inflammatory Pathways Implicated by Whole Blood Transcriptomic Analysis in a Diverse Ancestry Alzheimer's Disease Cohort.
.
J Alzheimers Dis. 76(3):1047-1060.
PubMed
Butkiewicz M
,
Haines JL
,
Bush WS
. 2017.
Introducing COCOS: codon consequence scanner for annotating reading frame changes induced by stop-lost and frame shift variants.
.
Bioinformatics. 33(10):1561-1562.
PubMed
P
Bush WS
,
Wheeler N
,
Beaulieu-Jones B
,
Darabos C
. 2020.
Packaging Biocomputing Software to Maximize Distribution and Reuse.
.
Pac Symp Biocomput. 25:739-742.
PubMed
Tang Z-Z
,
Sliwoski GR
,
Chen G
,
Jin B
,
Bush WS
,
Li B
,
Capra JA
. 2020.
PSCAN: Spatial scan tests guided by protein structures improve complex disease gene discovery and signal variant detection.
.
Genome Biol. 21(1):217.
PubMed
Q
Naj AC
,
Lin H
,
Vardarajan BN
,
White S
,
Lancour D
,
Ma Y
,
Schmidt M
,
Sun F
,
Butkiewicz M
,
Bush WS
et al.
. 2018.
Quality control and integration of genotypes from two calling pipelines for whole genome sequence data in the Alzheimer's disease sequencing project.
.
Genomics.
PubMed
R
Gardner OK
,
Wang L
,
Van Booven D
,
Whitehead PL
,
Hamilton-Nelson KL
,
Adams LD
,
Starks TD
,
Hofmann NK
,
Vance JM
,
Cuccaro ML
et al.
. 2019.
RNA editing alterations in a multi-ethnic Alzheimer disease cohort converge on immune and endocytic molecular pathways.
.
Hum Mol Genet. 28(18):3053-3061.
PubMed
S
Dumitrescu L
,
Barnes LL
,
Thambisetty M
,
Beecham G
,
Kunkle B
,
Bush WS
,
Gifford KA
,
Chibnik LB
,
Mukherjee S
,
De Jager PL
et al.
. 2019.
Sex differences in the genetic predictors of Alzheimer's pathology.
.
Brain. 142(9):2581-2589.
PubMed
Deming Y
,
Dumitrescu L
,
Barnes LL
,
Thambisetty M
,
Kunkle B
,
Gifford KA
,
Bush WS
,
Chibnik LB
,
Mukherjee S
,
De Jager PL
et al.
. 2018.
Sex-specific genetic predictors of Alzheimer's disease biomarkers.
.
Acta Neuropathol. 136(6):857-872.
PubMed
W
Bis JC
,
Jian X
,
Kunkle BW
,
Chen Y
,
Hamilton-Nelson KL
,
Bush WS
,
Salerno WJ
,
Lancour D
,
Ma Y
,
Renton AE
et al.
. 2018.
Whole exome sequencing study identifies novel rare and common Alzheimer's-Associated variants involved in immune response and transcriptional regulation.
.
Mol Psychiatry.
PubMed
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